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As I am not confident with
As I am not confident with blind svn:merge-info property deletion, I have implemented a tool to analyze the current situation on a working copy and remove as much merge revisions as possible from non-root merge-info properties. After additional human checks and controls, the changes on the working copy can be committed.
Here it is: https://github.com/ymartin59/svn-clean-mergeinfo
Do not hesitate to report any issue about its usage to get it improved.